PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rsa1.0_00451.1_g00016.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
Family bZIP
Protein Properties Length: 275aa    MW: 30545.9 Da    PI: 10.7536
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rsa1.0_00451.1_g00016.1genomeRGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_139.71e-12205259758
                              HHCHHHHHHHHHHHHHHHHH...HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1   7 errkqkNReAArrsRqRKka...eieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                               +r++kNRe+A rsR+RK++   ++ eLe kv++L+aeN +Lk + ++lk  +a+
  Rsa1.0_00451.1_g00016.1 205 HKRMIKNRESAARSRARKQEcaaYTNELELKVAQLKAENARLKRQQDQLKMAAAN 259
                              69****************954449*************************987765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.7E-5199266IPR004827Basic-leucine zipper domain
PfamPF001701.7E-10203256IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.4E-11203255No hitNo description
CDDcd147075.56E-23203260No hitNo description
SuperFamilySSF579595.47E-8204254No hitNo description
PROSITE patternPS000360206221IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009911Biological Processpositive regulation of flower development
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:2000028Biological Processregulation of photoperiodism, flowering
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0043621Molecular Functionprotein self-association
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    Send to blast
MFTSAKHQRN HRVSAPNKNK TLNKVSSISS SSSPVHPQDS QSLKRSLVTM EEVWNDISLA  60
SIHHVNRQSQ HQQQNHEPRF STLNHQNQNP NSIFQDFLNR PLNQELAIPT SLTMGSSSNG  120
HSTTVTALFS SSPLAPPATV LSLNSGAGFE FLDNQDPLVT PNSNLHSYNH LTNVASLDTP  180
FEALVTSTCN KRSHESNGGS GNRHHKRMIK NRESAARSRA RKQECAAYTN ELELKVAQLK  240
AENARLKRQQ DQLKMAAANQ QPKKNTLQRS STAPF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006412047.11e-145hypothetical protein EUTSA_v10025822mg
SwissprotQ84JK21e-130FD_ARATH; Protein FD
TrEMBLV4LSE71e-145V4LSE7_EUTSA; Uncharacterized protein
STRINGAl_scaffold_0007_4531e-134(Arabidopsis lyrata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM19342772
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35900.11e-126bZIP family protein